I am old enough to remember the progression from total cholesterol being bad, to “no, it’s really the LDL,” to “no, it’s really the small, dense LDL,” and now to “no, it’s really the oxidised LDL.” I guess “no, it’s really the ApoB” is the next stage in the progression. At some point, we’re going to have to realise that it’s not about lipids at all, but I suspect that, as Planck observed, a lot of people in authority are going to have to die off, first, before any new idea can take hold.
At any rate, the ratio of triglycerides to HDL and the particle-size pattern (large, buoyant versus small, dense) have as strong an association with cardiovascular risk as anything else, and are better predictors of risk than other lipid values (they also associate so strongly that a low ratio of triglycerides to HDL is an absolute predictor of a healthy Pattern A of particle sizes).
Myself, I don’t believe that cholesterol or lipid particles have any kind of causal role in cardiovascular disease; at best they are markers for the disease, and the presence of cholesterol in arterial plaque seems to be part of the repair process. As Dr. Phinney likes to say, “Blaming atherosclerosis on cholesterol makes about as much sense as blaming fires on fire engines.”